Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DWW08_08730 | Not Available | Positive | 1974936 - 1978205 | 120460.0 |
| susd family outer membrane lipoprotein nanu | DWW08_08735 | Not Available | Positive | 1978234 - 1979805 | 59698.7 |
| ragb/susd family nutrient uptake outer membrane protein | DWW08_08740 | Not Available | Negative | 1980014 - 1981576 | 59153.5 |
| tonb-dependent receptor | DWW08_08745 | Not Available | Negative | 1981594 - 1984917 | 122376.0 |
| atp-binding protein | DWW08_08750 | Not Available | Positive | 1985396 - 1986718 | 51763.1 |
| hypothetical protein | DWW08_08760 | Not Available | Positive | 1987461 - 1988711 | 47683.1 |
| ragb/susd family nutrient uptake outer membrane protein | DWW08_08765 | Not Available | Negative | 1988824 - 1990440 | 60720.7 |
| tonb-dependent receptor | DWW08_08770 | Not Available | Negative | 1990469 - 1993738 | 120572.0 |
| yhch/yjgk/yial family protein | DWW08_08775 | Not Available | Negative | 1994199 - 1994645 | 16811.3 |
| mfs transporter | DWW08_08780 | Not Available | Negative | 1994658 - 1995896 | 45150.0 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



