Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DWW08_08520 | Not Available | Negative | 1926483 - 1927721 | 45925.4 |
| 30s ribosome-binding factor rbfa | DWW08_08525 | Not Available | Negative | 1927718 - 1928050 | 12711.7 |
| methyltransferase | DWW08_08530 | Not Available | Negative | 1928215 - 1928853 | 24523.5 |
| pyruvate kinase | DWW08_08535 | Not Available | Negative | 1928860 - 1930317 | 54205.5 |
| type ii 3-dehydroquinate dehydratase | DWW08_08540 | Not Available | Negative | 1930345 - 1930764 | 15400.6 |
| site-specific tyrosine recombinase xerd | DWW08_08545 | Not Available | Positive | 1930838 - 1931797 | 37009.9 |
| tetratricopeptide repeat protein | DWW08_08550 | Not Available | Positive | 1932031 - 1933692 | 60337.8 |
| ahpc/tsa family protein | DWW08_08555 | Not Available | Positive | 1933803 - 1934873 | 40417.4 |
| atp-binding protein | DWW08_08560 | Not Available | Positive | 1934909 - 1936447 | 56292.1 |
| hypothetical protein | DWW08_08565 | Not Available | Positive | 1936470 - 1938152 | 66407.4 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



