Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-binding protein | DWW08_08465 | Not Available | Positive | 1908705 - 1910354 | 62426.5 |
| pas domain s-box protein | DWW08_08470 | Not Available | Negative | 1910412 - 1911980 | 59697.5 |
| adenosylhomocysteinase | DWW08_08475 | Not Available | Positive | 1912122 - 1913585 | 54189.1 |
| hypothetical protein | DWW08_08480 | Not Available | Positive | 1913690 - 1916191 | 93812.4 |
| arylsulfatase | DWW08_08490 | Not Available | Negative | 1917359 - 1918900 | 58234.1 |
| ragb/susd family nutrient uptake outer membrane protein | DWW08_08495 | Not Available | Negative | 1919043 - 1920992 | 73713.6 |
| susc/raga family tonb-linked outer membrane protein | DWW08_08500 | Not Available | Negative | 1921014 - 1924535 | 130363.0 |
| fecr family protein | DWW08_08505 | Not Available | Negative | 1924578 - 1925537 | 37348.1 |
| rna polymerase sigma-70 factor | DWW08_08510 | Not Available | Positive | 1925688 - 1926239 | 21870.1 |
| hypothetical protein | DWW08_08515 | Not Available | Positive | 1926297 - 1926497 | 7963.88 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



