Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | DWW08_08300 | Not Available | Positive | 1857480 - 1858001 | 19690.4 |
| outer membrane protein assembly factor bamd | DWW08_08305 | Not Available | Positive | 1858041 - 1861049 | 114929.0 |
| tonb-dependent receptor | DWW08_08310 | Not Available | Positive | 1861056 - 1862759 | 63704.9 |
| type i dna topoisomerase | DWW08_08315 | Not Available | Positive | 1862880 - 1865225 | 88704.1 |
| duf4842 domain-containing protein | DWW08_08320 | Not Available | Positive | 1865397 - 1866374 | 36418.4 |
| arginine--trna ligase | DWW08_08325 | Not Available | Negative | 1866475 - 1868268 | 66729.1 |
| hu family dna-binding protein | DWW08_08330 | Not Available | Negative | 1868356 - 1868628 | 9369.43 |
| rhomboid family intramembrane serine protease | DWW08_08335 | Not Available | Positive | 1868876 - 1869550 | 25492.5 |
| rhomboid family intramembrane serine protease | DWW08_08340 | Not Available | Positive | 1869531 - 1870430 | 33923.7 |
| endonuclease | DWW08_08345 | Not Available | Positive | 1870434 - 1871531 | 41318.4 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



