Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| butyrate kinase | DWW08_07830 | Not Available | Negative | 1725898 - 1727013 | 40124.3 |
| phosphate butyryltransferase | DWW08_07835 | Not Available | Negative | 1727023 - 1727976 | 34994.3 |
| glycoside hydrolase family 16 protein | DWW08_07840 | Not Available | Positive | 1728159 - 1728950 | 30367.9 |
| ld-carboxypeptidase | DWW08_07845 | Not Available | Positive | 1728970 - 1729884 | 34104.5 |
| glutamine cyclotransferase | DWW08_07850 | Not Available | Positive | 1729940 - 1730944 | 37244.9 |
| sufe family protein | DWW08_07855 | Not Available | Positive | 1730954 - 1731382 | 16167.4 |
| transcriptional regulator | DWW08_07860 | Not Available | Negative | 1731436 - 1731654 | 7973.93 |
| duf2975 domain-containing protein | DWW08_07865 | Not Available | Negative | 1731683 - 1732321 | 23767.3 |
| cpbp family intramembrane metalloprotease | DWW08_07870 | Not Available | Negative | 1732357 - 1733145 | 29067.7 |
| bifunctional riboflavin kinase/fad synthetase | DWW08_07875 | Not Available | Negative | 1734058 - 1734999 | 35495.6 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



