Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW170_03115 | Not Available | Negative | 638438 - 638818 | 14911.6 |
| tetr/acrr family transcriptional regulator | DW170_03125 | Not Available | Negative | 640173 - 640793 | 24020.1 |
| hypothetical protein | DW170_03135 | Not Available | Negative | 641324 - 641623 | 11623.8 |
| hypothetical protein | DW170_03140 | Not Available | Negative | 641620 - 641784 | 6383.38 |
| 4-oxalocrotonate tautomerase | DW170_03145 | Not Available | Positive | 641955 - 642140 | 6852.53 |
| atp-binding protein | DW170_03150 | Not Available | Positive | 642169 - 645243 | 116952.0 |
| pyridoxal phosphate-dependent aminotransferase family protein | DW170_03155 | Not Available | Negative | 645465 - 646736 | 46633.5 |
| hypothetical protein | DW170_03160 | Not Available | Negative | 646745 - 646921 | 6854.35 |
| tetr/acrr family transcriptional regulator | DW170_03165 | Not Available | Positive | 647081 - 647824 | 28552.6 |
| type vi secretion system needle protein hcp | DW170_03170 | Not Available | Positive | 648265 - 648654 | 14490.1 |
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



