Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4369 domain-containing protein | DWW08_07780 | Not Available | Negative | 1710138 - 1711289 | 42640.1 |
| polyribonucleotide nucleotidyltransferase | DWW08_07785 | Not Available | Positive | 1711486 - 1713612 | 78294.5 |
| rna polymerase sigma-70 factor | DWW08_07790 | Not Available | Positive | 1713776 - 1714336 | 22073.6 |
| fecr family protein | DWW08_07795 | Not Available | Positive | 1714437 - 1715369 | 36158.3 |
| susc/raga family tonb-linked outer membrane protein | DWW08_07800 | Not Available | Positive | 1715629 - 1718949 | 122228.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWW08_07805 | Not Available | Positive | 1718962 - 1720578 | 60397.7 |
| hypothetical protein | DWW08_07810 | Not Available | Positive | 1721079 - 1722698 | 59471.1 |
| hypothetical protein | DWW08_07815 | Not Available | Positive | 1722830 - 1723147 | 12520.0 |
| duf1566 domain-containing protein | DWW08_07820 | Not Available | Positive | 1723419 - 1724996 | 56596.3 |
| duf4469 domain-containing protein | DWW08_07825 | Not Available | Positive | 1725029 - 1725787 | 27370.4 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



