Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | DWW08_07725 | Not Available | Positive | 1702169 - 1703044 | 34132.2 |
| duf1349 domain-containing protein | DWW08_07730 | Not Available | Negative | 1703203 - 1703853 | 25222.3 |
| sugar o-acetyltransferase | DWW08_07735 | Not Available | Negative | 1703877 - 1704464 | 22020.3 |
| helix-turn-helix transcriptional regulator | DWW08_07740 | Not Available | Positive | 1704473 - 1705309 | 32409.3 |
| methylated-dna--[protein]-cysteine s-methyltransferase | DWW08_07745 | Not Available | Negative | 1705334 - 1706188 | 32105.4 |
| methylated-dna--[protein]-cysteine s-methyltransferase | DWW08_07750 | Not Available | Negative | 1706195 - 1706716 | 19645.2 |
| Trna-leu | Not Available | Not Available | Positive | 1707639 - 1707725 | Not Available |
| mannose-1-phosphate guanylyltransferase | DWW08_07765 | Not Available | Positive | 1707882 - 1708964 | 40314.2 |
| hit family protein | DWW08_07770 | Not Available | Negative | 1709036 - 1709440 | 14912.2 |
| transcription elongation factor grea | DWW08_07775 | Not Available | Negative | 1709492 - 1709956 | 16877.5 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



