Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4974 domain-containing protein | DWW08_07615 | Not Available | Negative | 1670526 - 1671491 | 37324.4 |
| rna polymerase sigma-70 factor | DWW08_07620 | Not Available | Negative | 1671557 - 1672105 | 21841.1 |
| helicase | DWW08_07625 | Not Available | Negative | 1672238 - 1674241 | 76546.8 |
| dna-binding protein | DWW08_07630 | Not Available | Positive | 1674649 - 1675269 | 23708.3 |
| hypothetical protein | DWW08_07635 | Not Available | Negative | 1675356 - 1675847 | 18711.6 |
| sgnh/gdsl hydrolase family protein | DWW08_07640 | Not Available | Negative | 1676234 - 1678759 | 94106.2 |
| nudix hydrolase | DWW08_07645 | Not Available | Positive | 1678886 - 1679446 | 21592.7 |
| histidine kinase | DWW08_07650 | Not Available | Positive | 1679711 - 1680733 | 39852.3 |
| dna-binding response regulator | DWW08_07655 | Not Available | Positive | 1680742 - 1681497 | 28732.5 |
| 4fe-4s dicluster domain-containing protein | DWW08_07660 | Not Available | Positive | 1681521 - 1683026 | 54893.5 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



