Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine exporter | DWW08_07100 | Not Available | Negative | 1554419 - 1555186 | 27815.3 |
| putative transporter | DWW08_07105 | Not Available | Negative | 1555307 - 1556995 | 60663.7 |
| hypothetical protein | DWW08_07110 | Not Available | Negative | 1557008 - 1557223 | 8058.71 |
| tonb-dependent receptor | DWW08_07115 | Not Available | Positive | 1558496 - 1560631 | 79103.5 |
| sirohydrochlorin cobaltochelatase | DWW08_07120 | Not Available | Positive | 1560635 - 1561552 | 33944.5 |
| tonb-dependent receptor | DWW08_07125 | Not Available | Positive | 1561549 - 1563903 | 87943.0 |
| pepsy domain-containing protein | DWW08_07130 | Not Available | Positive | 1563921 - 1565375 | 56424.4 |
| cobaltochelatase subunit cobn | DWW08_07135 | Not Available | Positive | 1565377 - 1569315 | 147674.0 |
| hypothetical protein | DWW08_07140 | Not Available | Positive | 1569318 - 1569878 | 20806.6 |
| mota/tolq/exbb proton channel family protein | DWW08_07145 | Not Available | Positive | 1569895 - 1570509 | 22696.9 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



