Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | DWW08_07050 | Not Available | Positive | 1543925 - 1544248 | 12750.6 |
| tolc family protein | DWW08_07055 | Not Available | Positive | 1544332 - 1545780 | 53979.3 |
| hlyd family efflux transporter periplasmic adaptor subunit | DWW08_07060 | Not Available | Positive | 1545796 - 1546794 | 36640.3 |
| abc transporter permease | DWW08_07065 | Not Available | Positive | 1546941 - 1548113 | 43750.3 |
| abc transporter permease | DWW08_07070 | Not Available | Positive | 1548097 - 1549287 | 44521.9 |
| histidine kinase | DWW08_07075 | Not Available | Negative | 1549250 - 1551154 | 72534.2 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DWW08_07080 | Not Available | Negative | 1551191 - 1551766 | 22160.7 |
| cobyrinate a,c-diamide synthase | DWW08_07085 | Not Available | Negative | 1551763 - 1553097 | 49784.0 |
| hypothetical protein | DWW08_07090 | Not Available | Negative | 1553169 - 1553903 | 28241.6 |
| threonine/serine exporter | DWW08_07095 | Not Available | Negative | 1553937 - 1554422 | 17510.2 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



