Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | DWW08_06995 | Not Available | Positive | 1534914 - 1535525 | 23384.9 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | DWW08_07000 | Not Available | Positive | 1535537 - 1536574 | 37926.1 |
| adenosylcobinamide-gdp ribazoletransferase | DWW08_07005 | Not Available | Positive | 1536586 - 1537329 | 27618.5 |
| alpha-ribazole phosphatase | DWW08_07010 | Not Available | Positive | 1537458 - 1538048 | 22042.0 |
| cobalamin biosynthesis protein cobd | DWW08_07015 | Not Available | Negative | 1537981 - 1538946 | 35793.1 |
| threonine-phosphate decarboxylase | DWW08_07020 | Not Available | Negative | 1538972 - 1539985 | 37918.6 |
| cobyric acid synthase | DWW08_07025 | Not Available | Negative | 1539978 - 1541465 | 55031.1 |
| dna-binding protein | DWW08_07035 | Not Available | Positive | 1542087 - 1542878 | 30170.5 |
| hypothetical protein | DWW08_07040 | Not Available | Negative | 1543185 - 1543448 | 10440.7 |
| hypothetical protein | DWW08_07045 | Not Available | Positive | 1543581 - 1543928 | 13278.9 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



