Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWW08_06790 | Not Available | Positive | 1485761 - 1486000 | 9483.81 |
| xre family transcriptional regulator | DWW08_06795 | Not Available | Positive | 1486912 - 1487367 | 17544.9 |
| dihydroorotate dehydrogenase electron transfer subunit | DWW08_06800 | Not Available | Positive | 1487437 - 1488213 | 28523.8 |
| dihydroorotate dehydrogenase | DWW08_06805 | Not Available | Positive | 1488201 - 1489112 | 32377.6 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DWW08_06810 | Not Available | Negative | 1489329 - 1490006 | 25633.8 |
| nad-dependent dna ligase liga | DWW08_06815 | Not Available | Positive | 1490083 - 1492080 | 75366.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | DWW08_06820 | Not Available | Positive | 1492184 - 1493077 | 32678.9 |
| Trna-arg | Not Available | Not Available | Positive | 1493292 - 1493368 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1493386 - 1493459 | Not Available |
| patatin | DWW08_06835 | Not Available | Negative | 1493539 - 1495839 | 88757.4 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



