Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DWW08_06690 | Not Available | Negative | 1465009 - 1466193 | 43773.0 |
| yegs/rv2252/bmru family lipid kinase | DWW08_06695 | Not Available | Positive | 1466428 - 1467471 | 38402.4 |
| aspartate--trna ligase | DWW08_06700 | Not Available | Positive | 1467555 - 1469312 | 66208.6 |
| gtra family protein | DWW08_06705 | Not Available | Positive | 1469313 - 1469696 | 14893.4 |
| acyltransferase | DWW08_06710 | Not Available | Negative | 1469779 - 1470663 | 33137.4 |
| agmatine deiminase family protein | DWW08_06715 | Not Available | Negative | 1470676 - 1471791 | 41738.9 |
| ferredoxin | DWW08_06720 | Not Available | Negative | 1471865 - 1472395 | 19075.3 |
| atp-binding cassette domain-containing protein | DWW08_06725 | Not Available | Positive | 1472490 - 1473110 | 22802.9 |
| abc transporter permease | DWW08_06730 | Not Available | Positive | 1473115 - 1473909 | 29581.8 |
| hypothetical protein | DWW08_06735 | Not Available | Positive | 1473916 - 1474197 | 10990.4 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



