Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose/gdp-mannose dehydrogenase family protein | DWW08_06530 | Not Available | Positive | 1426799 - 1428112 | 48565.0 |
| duf4738 domain-containing protein | DWW08_06535 | Not Available | Positive | 1428251 - 1429054 | 30640.7 |
| atp-dependent helicase | DWW08_06540 | Not Available | Negative | 1429125 - 1430381 | 46686.3 |
| phosphoserine phosphatase serb | DWW08_06545 | Not Available | Negative | 1430462 - 1431685 | 45611.8 |
| hypothetical protein | DWW08_06555 | Not Available | Positive | 1431956 - 1432465 | 18888.5 |
| yjgp/yjgq family permease | DWW08_06560 | Not Available | Negative | 1432630 - 1433727 | 41986.8 |
| trna guanosine(34) transglycosylase tgt | DWW08_06565 | Not Available | Negative | 1433732 - 1434862 | 42346.2 |
| endopeptidase la | DWW08_06570 | Not Available | Negative | 1434859 - 1437327 | 92548.9 |
| trna1(val) (adenine(37)-n6)-methyltransferase | DWW08_06575 | Not Available | Positive | 1437512 - 1438225 | 26745.0 |
| hypothetical protein | DWW08_06580 | Not Available | Negative | 1438628 - 1438858 | 8805.85 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



