Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| terminase small subunit | DWW08_06005 | Not Available | Positive | 1328029 - 1328514 | 18484.2 |
| pbsx family phage terminase large subunit | DWW08_06010 | Not Available | Positive | 1328514 - 1330526 | 77763.7 |
| hypothetical protein | DWW08_06015 | Not Available | Positive | 1330825 - 1331013 | 7363.84 |
| hepn domain-containing protein | DWW08_06020 | Not Available | Positive | 1331040 - 1331453 | 16237.4 |
| hypothetical protein | DWW08_06025 | Not Available | Positive | 1331456 - 1331821 | 14472.2 |
| protein export chaperone secb | DWW08_06030 | Not Available | Positive | 1331825 - 1332244 | 15756.3 |
| hypothetical protein | DWW08_06035 | Not Available | Positive | 1332245 - 1332496 | 9818.78 |
| hypothetical protein | DWW08_06040 | Not Available | Negative | 1332634 - 1332822 | 7382.19 |
| hypothetical protein | DWW08_06045 | Not Available | Negative | 1332849 - 1333049 | 7627.18 |
| transcriptional regulator | DWW08_06050 | Not Available | Negative | 1333350 - 1334135 | 30009.1 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



