Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsule biosynthesis protein | DWW08_05610 | Not Available | Positive | 1270075 - 1272351 | 83346.3 |
| ribonucleoside-diphosphate reductase subunit alpha | DWW08_05615 | Not Available | Positive | 1272973 - 1275489 | 95558.5 |
| ribonucleotide-diphosphate reductase subunit beta | DWW08_05620 | Not Available | Positive | 1275509 - 1276558 | 41402.9 |
| hypothetical protein | DWW08_05625 | Not Available | Negative | 1276807 - 1277037 | 8997.15 |
| efflux rnd transporter periplasmic adaptor subunit | DWW08_05640 | Not Available | Negative | 1281354 - 1282547 | 43588.3 |
| hypothetical protein | DWW08_05645 | Not Available | Negative | 1282734 - 1283216 | 18020.8 |
| hypothetical protein | DWW08_05655 | Not Available | Positive | 1283936 - 1284370 | 16245.0 |
| duf4375 domain-containing protein | DWW08_05660 | Not Available | Positive | 1284244 - 1284660 | 16056.8 |
| hypothetical protein | DWW08_05670 | Not Available | Positive | 1285304 - 1285774 | 17490.3 |
| hypothetical protein | DWW08_05675 | Not Available | Positive | 1285813 - 1286052 | 9995.93 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



