Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | DWW08_05555 | Not Available | Positive | 1255140 - 1256009 | 33944.0 |
| tonb-dependent receptor | DWW08_05565 | Not Available | Positive | 1256826 - 1259057 | 84084.0 |
| susc/raga family tonb-linked outer membrane protein | DWW08_05570 | Not Available | Positive | 1259102 - 1262479 | 126937.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW08_05575 | Not Available | Positive | 1262490 - 1263995 | 58375.4 |
| hypothetical protein | DWW08_05580 | Not Available | Positive | 1264034 - 1265038 | 38888.8 |
| duf4302 domain-containing protein | DWW08_05585 | Not Available | Positive | 1265044 - 1266069 | 39833.2 |
| hypothetical protein | DWW08_05590 | Not Available | Positive | 1266091 - 1266726 | 23896.5 |
| duf4856 domain-containing protein | DWW08_05595 | Not Available | Positive | 1266744 - 1267931 | 45139.5 |
| hypothetical protein | DWW08_05600 | Not Available | Positive | 1267940 - 1269043 | 42187.4 |
| hypothetical protein | DWW08_05605 | Not Available | Positive | 1269071 - 1269994 | 34493.0 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



