Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWW08_05500 | Not Available | Negative | 1239798 - 1240340 | 20929.8 |
| peptidase s41 | DWW08_05505 | Not Available | Positive | 1240470 - 1241840 | 51018.9 |
| aldo/keto reductase | DWW08_05515 | Not Available | Negative | 1242441 - 1243283 | 32060.4 |
| class i sam-dependent methyltransferase | DWW08_05520 | Not Available | Positive | 1243688 - 1244461 | 29547.9 |
| protoporphyrinogen oxidase | DWW08_05525 | Not Available | Negative | 1244642 - 1246030 | 51164.7 |
| oxygen-independent coproporphyrinogen iii oxidase | DWW08_05530 | Not Available | Negative | 1246033 - 1247397 | 51675.2 |
| mfs transporter | DWW08_05535 | Not Available | Negative | 1247403 - 1248632 | 45988.0 |
| tonb-dependent receptor | DWW08_05540 | Not Available | Negative | 1248650 - 1250719 | 78417.0 |
| collagen-like protein | DWW08_05545 | Not Available | Positive | 1251350 - 1253632 | 83389.2 |
| ompa family protein | DWW08_05550 | Not Available | Positive | 1253645 - 1254841 | 45951.6 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



