Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication-associated recombination protein a | DWW08_05400 | Not Available | Negative | 1211531 - 1212802 | 47463.1 |
| beta-galactosidase | DWW08_05405 | Not Available | Negative | 1212827 - 1215421 | 96935.6 |
| carboxypeptidase-like regulatory domain-containing protein | DWW08_05410 | Not Available | Negative | 1215461 - 1218022 | 98077.9 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | DWW08_05415 | Not Available | Negative | 1218136 - 1219293 | 42918.2 |
| trimeric intracellular cation channel family protein | DWW08_05420 | Not Available | Positive | 1219306 - 1219932 | 22856.8 |
| duf4251 domain-containing protein | DWW08_05425 | Not Available | Negative | 1219946 - 1220440 | 18495.4 |
| protease | DWW08_05430 | Not Available | Negative | 1220702 - 1221670 | 36105.3 |
| lema family protein | DWW08_05435 | Not Available | Negative | 1221692 - 1222252 | 20930.3 |
| rna polymerase sigma factor | DWW08_05440 | Not Available | Positive | 1222543 - 1223046 | 19816.8 |
| oxaloacetate decarboxylase | DWW08_05445 | Not Available | Positive | 1223298 - 1225073 | 66767.0 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



