Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diphosphate--fructose-6-phosphate 1-phosphotransferase | DWW08_03590 | Not Available | Negative | 809020 - 810663 | 59836.0 |
| carbohydrate-binding protein | DWW08_03595 | Not Available | Negative | 810867 - 813686 | 103884.0 |
| duf4959 domain-containing protein | DWW08_03600 | Not Available | Negative | 813869 - 814765 | 32904.7 |
| ragb/susd family nutrient uptake outer membrane protein | DWW08_03605 | Not Available | Negative | 814787 - 816697 | 71810.7 |
| susc/raga family tonb-linked outer membrane protein | DWW08_03610 | Not Available | Negative | 816707 - 820084 | 125094.0 |
| fecr family protein | DWW08_03615 | Not Available | Negative | 820122 - 820751 | 24514.3 |
| hypothetical protein | DWW08_03620 | Not Available | Positive | 821063 - 821302 | 9591.83 |
| rna polymerase sigma-70 factor | DWW08_03625 | Not Available | Positive | 821493 - 822041 | 21917.4 |
| tolc family protein | DWW08_03630 | Not Available | Negative | 822059 - 823435 | 51753.1 |
| multidrug efflux rnd transporter permease subunit | DWW08_03635 | Not Available | Negative | 823439 - 826585 | 114556.0 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



