Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase | DWW08_03420 | Not Available | Negative | 771782 - 774361 | 95315.7 |
| methylcobamide--com methyltransferase | DWW08_03425 | Not Available | Negative | 774381 - 775385 | 36784.4 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | DWW08_03430 | Not Available | Negative | 775394 - 776077 | 25479.8 |
| trimethylamine corrinoid protein | DWW08_03435 | Not Available | Negative | 776079 - 776714 | 22365.4 |
| methyltransferase | DWW08_03440 | Not Available | Negative | 776738 - 777988 | 46407.4 |
| glycosyl hydrolase | DWW08_03445 | Not Available | Negative | 778002 - 780587 | 94544.6 |
| ragb/susd family nutrient uptake outer membrane protein | DWW08_03450 | Not Available | Negative | 780765 - 782453 | 64209.8 |
| susc/raga family tonb-linked outer membrane protein | DWW08_03455 | Not Available | Negative | 782474 - 785701 | 119182.0 |
| fecr family protein | DWW08_03460 | Not Available | Negative | 785940 - 786962 | 38821.6 |
| rna polymerase sigma-70 factor | DWW08_03465 | Not Available | Negative | 787182 - 787778 | 23186.7 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



