Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWW08_02660 | Not Available | Negative | 608574 - 608975 | 15312.6 |
| rna polymerase sigma factor rpod/siga | DWW08_02665 | Not Available | Negative | 609075 - 609935 | 32703.2 |
| pdz domain-containing protein | DWW08_02675 | Not Available | Negative | 610170 - 611717 | 54728.4 |
| transglutaminase domain-containing protein | DWW08_02680 | Not Available | Negative | 612023 - 613363 | 51824.7 |
| dipeptide epimerase | DWW08_02685 | Not Available | Negative | 613389 - 614540 | 41901.2 |
| hypothetical protein | DWW08_02690 | Not Available | Negative | 614554 - 615756 | 44571.1 |
| yihy/virulence factor brkb family protein | DWW08_02700 | Not Available | Positive | 616503 - 617822 | 50852.3 |
| nad(p)h nitroreductase | DWW08_02705 | Not Available | Negative | 618418 - 618957 | 19693.1 |
| riboflavin synthase | DWW08_02710 | Not Available | Negative | 618969 - 619571 | 22597.1 |
| phosphate transport system regulatory protein phou | DWW08_02715 | Not Available | Negative | 619953 - 620642 | 26195.7 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



