Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5107 domain-containing protein | DWW08_02300 | Not Available | Negative | 533390 - 536683 | 126641.0 |
| mfs transporter | DWW08_02305 | Not Available | Negative | 536697 - 538076 | 51086.4 |
| arac family transcriptional regulator | DWW08_02310 | Not Available | Positive | 538214 - 539110 | 34682.6 |
| glycoside hydrolase family 3 protein | DWW08_02315 | Not Available | Negative | 539169 - 541820 | 99073.7 |
| cytochrome c biosynthesis protein | DWW08_02320 | Not Available | Negative | 541927 - 543363 | 54660.1 |
| hypothetical protein | DWW08_02325 | Not Available | Negative | 543375 - 544850 | 57563.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW08_02330 | Not Available | Negative | 544926 - 546563 | 61832.5 |
| susc/raga family tonb-linked outer membrane protein | DWW08_02335 | Not Available | Negative | 546585 - 549659 | 113198.0 |
| type iv secretion protein rhs | DWW08_02340 | Not Available | Negative | 549672 - 551080 | 49857.1 |
| hypothetical protein | DWW08_02345 | Not Available | Negative | 551105 - 551671 | 21729.4 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



