Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | DWW08_02195 | Not Available | Negative | 506893 - 507843 | 36392.1 |
| shikimate dehydrogenase | DWW08_02200 | Not Available | Negative | 507843 - 508586 | 27781.8 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | DWW08_02205 | Not Available | Negative | 508613 - 509350 | 27706.5 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DWW08_02210 | Not Available | Negative | 509473 - 510414 | 35431.5 |
| phosphate starvation-inducible protein phoh | DWW08_02215 | Not Available | Negative | 510434 - 511447 | 37736.6 |
| hypothetical protein | DWW08_02220 | Not Available | Positive | 511611 - 512291 | 25717.9 |
| flotillin family protein | DWW08_02225 | Not Available | Negative | 512367 - 514004 | 59803.6 |
| hypothetical protein | DWW08_02230 | Not Available | Negative | 514028 - 514525 | 18821.4 |
| alpha-1,3-galactosidase b | DWW08_02235 | Not Available | Positive | 514679 - 516466 | 67179.8 |
| duf4468 domain-containing protein | DWW08_02240 | Not Available | Positive | 516498 - 517652 | 43081.2 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



