Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocase subunit tatc | DWW08_02090 | Not Available | Negative | 483965 - 484765 | 30781.5 |
| twin-arginine translocase tata/tate family subunit | DWW08_02095 | Not Available | Negative | 484799 - 485026 | 8344.38 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | DWW08_02100 | Not Available | Negative | 485326 - 487872 | 95299.3 |
| gscfa domain protein | DWW08_02105 | Not Available | Negative | 487851 - 488837 | 38612.9 |
| blai/meci/copy family transcriptional regulator | DWW08_02110 | Not Available | Positive | 489261 - 489626 | 13960.5 |
| m56 family peptidase | DWW08_02115 | Not Available | Positive | 489662 - 491224 | 58200.8 |
| sensor histidine kinase | DWW08_02120 | Not Available | Positive | 491450 - 493492 | 78455.2 |
| 6-bladed beta-propeller | DWW08_02125 | Not Available | Negative | 493584 - 494720 | 43613.4 |
| hypothetical protein | DWW08_02130 | Not Available | Negative | 494722 - 495048 | 11970.2 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DWW08_02135 | Not Available | Negative | 495184 - 496098 | 35633.1 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



