Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 36 | DWW08_02040 | Not Available | Negative | 460947 - 463025 | 77977.9 |
| glycoside hydrolase family 29 | DWW08_02045 | Not Available | Negative | 463034 - 464416 | 52476.2 |
| duf229 domain-containing protein | DWW08_02050 | Not Available | Negative | 464422 - 465867 | 55118.3 |
| ragb/susd family nutrient uptake outer membrane protein | DWW08_02055 | Not Available | Negative | 465985 - 467967 | 74575.9 |
| tonb-dependent receptor | DWW08_02060 | Not Available | Negative | 467980 - 471165 | 118198.0 |
| response regulator | DWW08_02065 | Not Available | Positive | 471449 - 475435 | 151102.0 |
| mfs transporter | DWW08_02070 | Not Available | Negative | 475511 - 476956 | 53476.3 |
| alpha-l-fucosidase | DWW08_02075 | Not Available | Positive | 477413 - 478762 | 51428.3 |
| n-glycanase | DWW08_02080 | Not Available | Positive | 478776 - 480023 | 46569.5 |
| dna helicase | DWW08_02085 | Not Available | Negative | 480416 - 483883 | 132208.0 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



