Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsular polysaccharide transcription antiterminator upgy | DWW08_01615 | Not Available | Positive | 366501 - 367037 | 20295.2 |
| transcriptional regulator | DWW08_01620 | Not Available | Positive | 367057 - 367545 | 18359.5 |
| glucose-1-phosphate thymidylyltransferase | DWW08_01625 | Not Available | Positive | 367710 - 368600 | 32977.0 |
| nucleotide sugar dehydrogenase | DWW08_01635 | Not Available | Positive | 369296 - 370633 | 50353.3 |
| nad-dependent epimerase/dehydratase family protein | DWW08_01640 | Not Available | Positive | 370638 - 371696 | 39687.1 |
| hypothetical protein | DWW08_01645 | Not Available | Positive | 371765 - 371953 | 7218.81 |
| n-acetyltransferase | DWW08_01650 | Not Available | Positive | 372160 - 372684 | 20425.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DWW08_01655 | Not Available | Positive | 372684 - 373271 | 22134.4 |
| lipopolysaccharide biosynthesis protein | DWW08_01660 | Not Available | Positive | 373278 - 374705 | 52952.4 |
| degt/dnrj/eryc1/strs family aminotransferase | DWW08_01670 | Not Available | Positive | 375290 - 376420 | 41976.4 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



