Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | DWW08_01400 | Not Available | Negative | 315405 - 315959 | 22079.6 |
| glycoside hydrolase family 92 protein | DWW08_01405 | Not Available | Negative | 315974 - 318175 | 82977.4 |
| mfs transporter | DWW08_01410 | Not Available | Negative | 318678 - 319871 | 42728.3 |
| arac family transcriptional regulator | DWW08_01415 | Not Available | Positive | 320021 - 320875 | 33448.6 |
| hypothetical protein | DWW08_01425 | Not Available | Positive | 321598 - 322611 | 39204.6 |
| alanine--trna ligase | DWW08_01430 | Not Available | Negative | 322796 - 325414 | 97533.6 |
| m23 family peptidase | DWW08_01435 | Not Available | Positive | 325518 - 326486 | 36367.8 |
| merr family transcriptional regulator | DWW08_01440 | Not Available | Positive | 326501 - 326866 | 14492.5 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DWW08_01445 | Not Available | Negative | 326910 - 329156 | 86066.5 |
| lysm peptidoglycan-binding domain-containing protein | DWW08_01450 | Not Available | Negative | 329225 - 330523 | 49028.9 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



