Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cardiolipin synthase | DWW08_01350 | Not Available | Positive | 298870 - 300309 | 55678.1 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | DWW08_01355 | Not Available | Negative | 300327 - 300860 | 20513.4 |
| duf3822 family protein | DWW08_01360 | Not Available | Negative | 300851 - 301645 | 31111.9 |
| hypothetical protein | DWW08_01365 | Not Available | Negative | 301653 - 302336 | 25480.8 |
| duf2075 domain-containing protein | DWW08_01370 | Not Available | Positive | 302433 - 303851 | 53649.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWW08_01375 | Not Available | Negative | 303948 - 305681 | 66235.3 |
| susc/raga family tonb-linked outer membrane protein | DWW08_01380 | Not Available | Negative | 305703 - 309119 | 126329.0 |
| glycoside hydrolase family 92 protein | DWW08_01385 | Not Available | Negative | 309449 - 311719 | 86511.0 |
| glycoside hydrolase family 92 protein | DWW08_01390 | Not Available | Negative | 312057 - 314324 | 85371.5 |
| duf4974 domain-containing protein | DWW08_01395 | Not Available | Negative | 314354 - 315352 | 38047.5 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



