Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | DWW08_01300 | Not Available | Positive | 284322 - 285491 | 44556.2 |
| beta-n-acetylhexosaminidase | DWW08_01305 | Not Available | Positive | 285769 - 287730 | 73821.5 |
| tolc family protein | DWW08_01310 | Not Available | Positive | 288060 - 289379 | 49295.2 |
| hlyd family secretion protein | DWW08_01315 | Not Available | Positive | 289391 - 290425 | 38780.3 |
| hypothetical protein | DWW08_01320 | Not Available | Positive | 290429 - 292009 | 60478.4 |
| acyltransferase | DWW08_01325 | Not Available | Negative | 292213 - 293301 | 41626.9 |
| Trna-pro | Not Available | Not Available | Positive | 293604 - 293680 | Not Available |
| 3-dehydroquinate synthase | DWW08_01335 | Not Available | Negative | 294126 - 295187 | 39471.5 |
| hypothetical protein | DWW08_01340 | Not Available | Positive | 295324 - 295728 | 15277.7 |
| tonb-dependent receptor | DWW08_01345 | Not Available | Positive | 295801 - 298713 | 108701.0 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



