Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter permease | DWW08_01250 | Not Available | Negative | 274530 - 275339 | 29585.6 |
| phospholipase | DWW08_01255 | Not Available | Negative | 275378 - 275800 | 16108.2 |
| m20/m25/m40 family metallo-hydrolase | DWW08_01260 | Not Available | Positive | 275903 - 276904 | 37739.8 |
| hypothetical protein | DWW08_01265 | Not Available | Positive | 276912 - 278084 | 43749.4 |
| hypothetical protein | DWW08_01270 | Not Available | Positive | 278324 - 278515 | 6715.17 |
| hypothetical protein | DWW08_01275 | Not Available | Positive | 278641 - 281262 | 100437.0 |
| hypothetical protein | DWW08_01280 | Not Available | Negative | 281317 - 281577 | 10224.2 |
| hypothetical protein | DWW08_01285 | Not Available | Positive | 281616 - 281813 | 7318.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DWW08_01290 | Not Available | Negative | 281915 - 283150 | 45744.9 |
| arac family transcriptional regulator | DWW08_01295 | Not Available | Positive | 283435 - 284310 | 33836.1 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



