Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-recycling factor | DWW08_01100 | Not Available | Negative | 245280 - 245840 | 20765.3 |
| sh3 domain-containing protein | DWW08_01105 | Not Available | Negative | 245967 - 247025 | 39149.8 |
| l,d-transpeptidase | DWW08_01110 | Not Available | Negative | 247033 - 247587 | 20528.1 |
| sh3 domain-containing protein | DWW08_01115 | Not Available | Negative | 247598 - 250393 | 105877.0 |
| hsp70 family protein | DWW08_01120 | Not Available | Negative | 250421 - 252010 | 58632.2 |
| nucleotide exchange factor grpe | DWW08_01125 | Not Available | Negative | 252049 - 252897 | 32877.5 |
| ump kinase | DWW08_01130 | Not Available | Negative | 253654 - 254364 | 25606.2 |
| mate family efflux transporter | DWW08_01135 | Not Available | Negative | 254438 - 255757 | 49201.2 |
| hypothetical protein | DWW08_01140 | Not Available | Positive | 255895 - 256578 | 26098.3 |
| zinc-dependent metalloproteinase lipoprotein | DWW08_01145 | Not Available | Negative | 256602 - 257915 | 48836.2 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



