Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gxxexxy protein | DWW08_00685 | Not Available | Negative | 137181 - 137555 | 14123.6 |
| dna repair protein rada | DWW08_00690 | Not Available | Negative | 137610 - 138977 | 50203.0 |
| hypothetical protein | DWW08_00695 | Not Available | Positive | 139531 - 139728 | 7513.98 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | DWW08_00700 | Not Available | Positive | 140084 - 142519 | 88735.6 |
| cofactor-independent phosphoglycerate mutase | DWW08_00705 | Not Available | Positive | 142530 - 143741 | 44738.7 |
| threonine synthase | DWW08_00710 | Not Available | Positive | 143868 - 145169 | 47817.2 |
| dmt family transporter | DWW08_00715 | Not Available | Positive | 145495 - 146445 | 34179.1 |
| thiamine diphosphokinase | DWW08_00720 | Not Available | Negative | 146399 - 147022 | 22981.1 |
| nicotinamide riboside transporter pnuc | DWW08_00725 | Not Available | Negative | 147009 - 147581 | 22331.8 |
| tonb-dependent receptor | DWW08_00730 | Not Available | Negative | 147585 - 149804 | 83686.7 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



