Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | DWW08_00635 | Not Available | Positive | 125325 - 126539 | 45101.7 |
| pyridoxal phosphate-dependent aminotransferase | DWW08_00640 | Not Available | Positive | 126622 - 127815 | 43122.8 |
| 4fe-4s dicluster domain-containing protein | DWW08_00645 | Not Available | Negative | 127976 - 128146 | 5801.68 |
| homoserine o-succinyltransferase | DWW08_00650 | Not Available | Positive | 128306 - 129223 | 35800.8 |
| u32 family peptidase | DWW08_00655 | Not Available | Positive | 129220 - 131046 | 68693.6 |
| hypothetical protein | DWW08_00660 | Not Available | Positive | 131043 - 132017 | 37430.9 |
| hypothetical protein | DWW08_00665 | Not Available | Positive | 132134 - 132361 | 8960.13 |
| tonb-dependent receptor | DWW08_00670 | Not Available | Negative | 132280 - 134682 | 90385.0 |
| dna-binding response regulator | DWW08_00675 | Not Available | Negative | 134940 - 135539 | 22221.2 |
| fad-binding protein | DWW08_00680 | Not Available | Negative | 135548 - 137137 | 58945.6 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



