Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW170_23720 | Not Available | Positive | 5280846 - 5281035 | 7125.57 |
| group ii intron reverse transcriptase/maturase | DW170_23725 | Not Available | Positive | 5281668 - 5283314 | 63614.4 |
| trag family conjugative transposon atpase | DW170_23730 | Not Available | Positive | 5283323 - 5283437 | 4445.36 |
| type iv secretion protein rhs | DW170_23735 | Not Available | Positive | 5283438 - 5285806 | 87369.4 |
| hypothetical protein | DW170_23740 | Not Available | Negative | 5285807 - 5286066 | 8440.27 |
| smi1/knr4 family protein | DW170_23745 | Not Available | Negative | 5286087 - 5286677 | 22453.8 |
| hypothetical protein | DW170_23750 | Not Available | Negative | 5286679 - 5287422 | 28200.3 |
| hypothetical protein | DW170_23760 | Not Available | Positive | 5287761 - 5287958 | 7810.48 |
| hypothetical protein | DW170_23765 | Not Available | Negative | 5288142 - 5288926 | 28174.1 |
| rhs repeat protein | DW170_23770 | Not Available | Negative | 5288927 - 5290128 | 46261.4 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



