Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW170_23515 | Not Available | Negative | 5226183 - 5226386 | 7680.18 |
| dna methylase | DW170_23520 | Not Available | Negative | 5226875 - 5230912 | 154004.0 |
| hypothetical protein | DW170_23525 | Not Available | Negative | 5231677 - 5231955 | 10615.2 |
| d-alanyl-d-alanine dipeptidase | DW170_23530 | Not Available | Positive | 5232105 - 5232896 | 29992.5 |
| sam-dependent methyltransferase | DW170_23535 | Not Available | Positive | 5232905 - 5234104 | 44885.1 |
| duf4945 domain-containing protein | DW170_23540 | Not Available | Negative | 5234150 - 5234557 | 15270.5 |
| ragb/susd family nutrient uptake outer membrane protein | DW170_23545 | Not Available | Negative | 5234574 - 5236319 | 66663.7 |
| tonb-dependent receptor | DW170_23550 | Not Available | Negative | 5236331 - 5239522 | 118292.0 |
| duf2961 domain-containing protein | DW170_23555 | Not Available | Negative | 5239574 - 5241226 | 61935.8 |
| sugar porter family mfs transporter | DW170_23560 | Not Available | Negative | 5241250 - 5242623 | 49382.6 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



