Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein | DW170_23305 | Not Available | Positive | 5170331 - 5170894 | 20677.8 |
| helix-turn-helix domain-containing protein | DW170_23310 | Not Available | Positive | 5171208 - 5172383 | 45156.8 |
| metallophosphatase | DW170_23315 | Not Available | Negative | 5172397 - 5173848 | 54031.1 |
| metal-independent alpha-mannosidase | DW170_23320 | Not Available | Negative | 5173932 - 5175383 | 55153.1 |
| glycoside hydrolase | DW170_23325 | Not Available | Negative | 5175396 - 5177000 | 62401.3 |
| alkaline phosphatase | DW170_23330 | Not Available | Negative | 5177019 - 5178170 | 42139.3 |
| endonuclease | DW170_23335 | Not Available | Negative | 5178208 - 5179071 | 32487.3 |
| alpha-mannosidase | DW170_23340 | Not Available | Negative | 5179088 - 5182018 | 109139.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW170_23345 | Not Available | Negative | 5182041 - 5183672 | 62675.3 |
| tonb-dependent receptor | DW170_23350 | Not Available | Negative | 5183684 - 5186830 | 116517.0 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



