Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW170_23150 | Not Available | Positive | 5123390 - 5123845 | 17257.9 |
| tigr03905 family tscpd domain-containing protein | DW170_23155 | Not Available | Negative | 5123995 - 5124240 | 8870.74 |
| yebc/pmpr family dna-binding transcriptional regulator | DW170_23160 | Not Available | Negative | 5124240 - 5124977 | 27864.6 |
| phenylalanine--trna ligase subunit beta | DW170_23165 | Not Available | Negative | 5125073 - 5127535 | 90712.9 |
| udp-glcnac--udp-phosphate glcnac-1-phosphate transferase | DW170_23170 | Not Available | Negative | 5127685 - 5128638 | 36547.0 |
| tonb-dependent receptor | DW170_23175 | Not Available | Positive | 5129298 - 5132519 | 119108.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW170_23180 | Not Available | Positive | 5132531 - 5134546 | 76169.3 |
| hypothetical protein | DW170_23185 | Not Available | Positive | 5134589 - 5134777 | 7459.41 |
| sialidase | DW170_23190 | Not Available | Positive | 5134830 - 5136464 | 59559.3 |
| beta-n-acetylhexosaminidase | DW170_23195 | Not Available | Positive | 5136496 - 5138508 | 77332.4 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



