Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | DW170_22790 | Not Available | Positive | 5060972 - 5062315 | 49886.3 |
| hypothetical protein | DW170_22795 | Not Available | Positive | 5062329 - 5062490 | 6363.66 |
| hypothetical protein | DW170_22800 | Not Available | Positive | 5062528 - 5062812 | 10511.0 |
| rna pseudouridine synthase | DW170_22805 | Not Available | Negative | 5062961 - 5063626 | 25172.3 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | DW170_22810 | Not Available | Negative | 5063635 - 5064381 | 26173.7 |
| tetr/acrr family transcriptional regulator | DW170_22815 | Not Available | Negative | 5064394 - 5064990 | 22904.0 |
| Trna-met | Not Available | Not Available | Positive | 5065229 - 5065304 | Not Available |
| hypothetical protein | DW170_22825 | Not Available | Negative | 5065349 - 5065501 | 5883.13 |
| hypothetical protein | DW170_22835 | Not Available | Negative | 5065792 - 5067315 | 56716.8 |
| abc transporter permease | DW170_22840 | Not Available | Negative | 5067448 - 5068221 | 30297.8 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



