Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW170_22690 | Not Available | Positive | 5030190 - 5031644 | 55166.1 |
| gliding motility lipoprotein gldh | DW170_22695 | Not Available | Positive | 5031622 - 5032092 | 17847.4 |
| rod shape-determining protein roda | DW170_22700 | Not Available | Negative | 5032087 - 5033544 | 54381.9 |
| penicillin-binding protein 2 | DW170_22705 | Not Available | Negative | 5033525 - 5035381 | 69458.0 |
| rod shape-determining protein mred | DW170_22710 | Not Available | Negative | 5035384 - 5035881 | 18563.6 |
| rod shape-determining protein mrec | DW170_22715 | Not Available | Negative | 5035878 - 5036723 | 31904.9 |
| rod shape-determining protein | DW170_22720 | Not Available | Negative | 5036825 - 5037847 | 36911.8 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase purh | DW170_22725 | Not Available | Negative | 5037922 - 5039445 | 55974.8 |
| m13 family peptidase | DW170_22730 | Not Available | Negative | 5039597 - 5041630 | 76660.8 |
| abc transporter atp-binding protein | DW170_22735 | Not Available | Negative | 5041646 - 5043601 | 74180.7 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



