Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spor domain-containing protein | DW170_22565 | Not Available | Negative | 5008885 - 5009334 | 16599.2 |
| triose-phosphate isomerase | DW170_22570 | Not Available | Negative | 5009411 - 5010166 | 26594.8 |
| doxx family protein | DW170_22575 | Not Available | Negative | 5010215 - 5011546 | 50769.5 |
| duf1599 domain-containing protein | DW170_22580 | Not Available | Negative | 5011536 - 5012078 | 20570.9 |
| lysm peptidoglycan-binding domain-containing protein | DW170_22585 | Not Available | Negative | 5012183 - 5013064 | 32885.6 |
| nucleoside-diphosphate kinase | DW170_22590 | Not Available | Negative | 5013087 - 5013551 | 17439.0 |
| atp-dependent dna helicase recg | DW170_22595 | Not Available | Negative | 5013770 - 5015866 | 79231.2 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DW170_22600 | Not Available | Negative | 5015866 - 5016525 | 24578.9 |
| dj-1 family protein | DW170_22605 | Not Available | Negative | 5016530 - 5017081 | 19777.0 |
| tonb family protein | DW170_22610 | Not Available | Negative | 5017153 - 5017995 | 29531.1 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



