Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prephenate dehydrogenase/arogenate dehydrogenase family protein | DW170_22515 | Not Available | Positive | 4994678 - 4995451 | 29425.5 |
| hypothetical protein | DW170_22520 | Not Available | Positive | 4995669 - 4996043 | 14205.5 |
| dna primase | DW170_22525 | Not Available | Positive | 4996198 - 4998201 | 76471.6 |
| duf4976 domain-containing protein | DW170_22530 | Not Available | Negative | 4998235 - 4999827 | 59104.9 |
| duf4976 domain-containing protein | DW170_22535 | Not Available | Negative | 4999854 - 5001335 | 55280.5 |
| ragb/susd family nutrient uptake outer membrane protein | DW170_22540 | Not Available | Negative | 5001420 - 5003027 | 61088.2 |
| tonb-dependent receptor | DW170_22545 | Not Available | Negative | 5003041 - 5006418 | 125214.0 |
| duf4974 domain-containing protein | DW170_22550 | Not Available | Negative | 5006584 - 5007516 | 36471.7 |
| rna polymerase sigma-70 factor | DW170_22555 | Not Available | Negative | 5007592 - 5008170 | 22258.7 |
| gtp cyclohydrolase i fole | DW170_22560 | Not Available | Negative | 5008298 - 5008882 | 22405.4 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



