Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DW170_22465 | Not Available | Negative | 4980294 - 4981529 | 45081.1 |
| sialidase | DW170_22470 | Not Available | Negative | 4981535 - 4983193 | 61533.1 |
| exo-alpha-sialidase | DW170_22475 | Not Available | Negative | 4983217 - 4984317 | 40913.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW170_22480 | Not Available | Negative | 4984410 - 4985870 | 55137.4 |
| tonb-dependent receptor | DW170_22485 | Not Available | Negative | 4985884 - 4989180 | 121374.0 |
| n-acetylneuraminate lyase | DW170_22490 | Not Available | Negative | 4989270 - 4990178 | 33160.2 |
| fadr family transcriptional regulator | DW170_22495 | Not Available | Negative | 4990384 - 4991223 | 32048.6 |
| prephenate dehydratase | DW170_22500 | Not Available | Positive | 4991574 - 4992419 | 31947.3 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DW170_22505 | Not Available | Positive | 4992394 - 4993578 | 44349.4 |
| 3-deoxy-7-phosphoheptulonate synthase | DW170_22510 | Not Available | Positive | 4993601 - 4994662 | 39580.9 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



