Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW170_22415 | Not Available | Positive | 4971226 - 4971417 | 7579.3 |
| hypothetical protein | DW170_22420 | Not Available | Positive | 4971513 - 4971860 | 13942.7 |
| duf4373 domain-containing protein | DW170_22425 | Not Available | Positive | 4971999 - 4972832 | 30904.3 |
| hypothetical protein | DW170_22430 | Not Available | Positive | 4972939 - 4973097 | 6266.69 |
| dna-3-methyladenine glycosylase i | DW170_22435 | Not Available | Negative | 4973159 - 4973731 | 21924.2 |
| hypothetical protein | DW170_22440 | Not Available | Negative | 4974133 - 4974984 | 32591.9 |
| hypothetical protein | DW170_22445 | Not Available | Positive | 4975458 - 4975580 | 4536.83 |
| single-stranded-dna-specific exonuclease recj | DW170_22450 | Not Available | Positive | 4975582 - 4977300 | 64299.0 |
| recq family atp-dependent dna helicase | DW170_22455 | Not Available | Positive | 4977297 - 4979201 | 73146.2 |
| tetratricopeptide repeat protein | DW170_22460 | Not Available | Positive | 4979264 - 4980226 | 36229.9 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



