Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| creatininase family protein | DW170_22195 | Not Available | Negative | 4922217 - 4922978 | 28119.7 |
| tonb-dependent receptor | DW170_22200 | Not Available | Negative | 4923038 - 4925329 | 85940.7 |
| hypothetical protein | DW170_22205 | Not Available | Negative | 4925533 - 4925871 | 12496.3 |
| gaf domain-containing protein | DW170_22210 | Not Available | Negative | 4925909 - 4926382 | 17394.0 |
| bifunctional metallophosphatase/5'-nucleotidase | DW170_22215 | Not Available | Negative | 4926389 - 4928128 | 65555.8 |
| sensor histidine kinase | DW170_22220 | Not Available | Negative | 4928245 - 4930164 | 72084.0 |
| duf5106 domain-containing protein | DW170_22230 | Not Available | Negative | 4932534 - 4933517 | 37669.3 |
| duf4469 domain-containing protein | DW170_22235 | Not Available | Negative | 4933559 - 4933927 | 13861.1 |
| hypothetical protein | DW170_22240 | Not Available | Negative | 4933933 - 4935933 | 75402.9 |
| hypothetical protein | DW170_22245 | Not Available | Negative | 4936070 - 4937254 | 42985.8 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



