Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4099 domain-containing protein | DW170_22045 | Not Available | Negative | 4896828 - 4897586 | 28717.2 |
| m23 family peptidase | DW170_22050 | Not Available | Positive | 4897808 - 4898467 | 24159.7 |
| orotate phosphoribosyltransferase | DW170_22055 | Not Available | Negative | 4898500 - 4899336 | 32602.9 |
| hypothetical protein | DW170_22060 | Not Available | Negative | 4899470 - 4899628 | 6423.01 |
| hypothetical protein | DW170_22065 | Not Available | Positive | 4899642 - 4899872 | 8466.35 |
| hypothetical protein | DW170_22070 | Not Available | Positive | 4899873 - 4900040 | 6396.83 |
| ribonucleotide-diphosphate reductase subunit alpha | DW170_22075 | Not Available | Positive | 4900333 - 4900899 | 21405.5 |
| duf1273 family protein | DW170_22080 | Not Available | Positive | 4900901 - 4901404 | 18856.8 |
| hypothetical protein | DW170_22085 | Not Available | Positive | 4901517 - 4901693 | 6585.39 |
| deaminase | DW170_22090 | Not Available | Negative | 4901746 - 4902231 | 17483.0 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



