Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | DW170_21520 | Not Available | Negative | 4801350 - 4803011 | 60280.7 |
| site-specific tyrosine recombinase xerd | DW170_21525 | Not Available | Negative | 4803252 - 4804205 | 36532.5 |
| type ii 3-dehydroquinate dehydratase | DW170_21530 | Not Available | Positive | 4804279 - 4804698 | 15412.6 |
| pyruvate kinase | DW170_21535 | Not Available | Positive | 4804726 - 4806183 | 54093.4 |
| methyltransferase | DW170_21540 | Not Available | Positive | 4806192 - 4806830 | 24530.6 |
| hypothetical protein | DW170_21545 | Not Available | Positive | 4806854 - 4807114 | 10254.7 |
| 30s ribosome-binding factor rbfa | DW170_21550 | Not Available | Positive | 4807151 - 4807483 | 12755.8 |
| abc transporter permease | DW170_21555 | Not Available | Positive | 4807480 - 4808718 | 46201.9 |
| hypothetical protein | DW170_21560 | Not Available | Negative | 4808728 - 4808904 | 7017.81 |
| rna polymerase sigma-70 factor | DW170_21565 | Not Available | Negative | 4808962 - 4809513 | 21729.0 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



