Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW170_21455 | Not Available | Positive | 4787318 - 4789351 | 77722.5 |
| 6-bladed beta-propeller | DW170_21460 | Not Available | Negative | 4789467 - 4790666 | 45235.5 |
| site-specific integrase | DW170_21470 | Not Available | Positive | 4792434 - 4793666 | 47267.4 |
| hypothetical protein | DW170_21475 | Not Available | Positive | 4793684 - 4794076 | 14353.5 |
| hypothetical protein | DW170_21480 | Not Available | Positive | 4794073 - 4794405 | 12502.3 |
| mobilization protein | DW170_21485 | Not Available | Positive | 4794669 - 4796036 | 52634.9 |
| 23s rrna (adenine(2058)-n(6))-methyltransferase erm(f) | DW170_21490 | Not Available | Negative | 4796234 - 4797034 | 30309.3 |
| hypothetical protein | DW170_21495 | Not Available | Positive | 4797280 - 4798005 | 28359.0 |
| atp-binding protein | DW170_21510 | Not Available | Negative | 4798596 - 4800134 | 56266.0 |
| ahpc/tsa family protein | DW170_21515 | Not Available | Negative | 4800168 - 4801238 | 40416.4 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



