Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | DW170_21305 | Not Available | Positive | 4756343 - 4757368 | 38649.7 |
| dna-binding response regulator | DW170_21310 | Not Available | Positive | 4757361 - 4758134 | 29600.5 |
| Trna-met | Not Available | Not Available | Positive | 4758202 - 4758275 | Not Available |
| duf4491 family protein | DW170_21320 | Not Available | Negative | 4758372 - 4758683 | 11925.7 |
| asnc family transcriptional regulator | DW170_21325 | Not Available | Negative | 4758687 - 4759151 | 17309.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DW170_21330 | Not Available | Negative | 4759344 - 4760213 | 31628.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DW170_21335 | Not Available | Negative | 4760234 - 4760818 | 21156.4 |
| nad-dependent deacylase | DW170_21340 | Not Available | Positive | 4761285 - 4761995 | 26344.2 |
| glycosyltransferase | DW170_21345 | Not Available | Negative | 4761929 - 4762702 | 29693.4 |
| glycosyltransferase | DW170_21350 | Not Available | Negative | 4762695 - 4763960 | 47889.9 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



